Participants of XII Discussions

Participants of the XII Discussions in Structural Molecular Biology, Nove Hrady, March 13 – 15 2014

IDFirstLastemailTitle of PresentationInstitutionCity
47ImrichBarakimrich.barak-at-savba.skUser consortium of serial femtosecond crystallography – Slovak involvementInstitute of Molecular Biology Slovak academy of SciencesBratislava
12AdrianaBaumlovaadrianabaumlova-at-gmail.comStructural characterization of phosphatidylinositol 4-phosphate IIalphaInstitute of Organic Chemistry and Biochemistry AS CRPrague
77LucieBednarovabednarova-at-uochb.cas.czRaman microspectroscopy of Candida albicans vacuolesInstitute of Organic Chemistry and Biochemistry AS CRPrague
37LadaBiedermannoválada.biedermannova-at-img.cas.czHydrated amino acid rotamersInstitute of Biotechnology AS CRVestec
18EvženBouřaboura-at-uochb.cas.czCombination of Xtal, SAXS, DEER and FRET data – the structure of ESCRT-I/II supercomplex and implications for membrane buddingInstitute of Organic Chemistry and Biochemistry AS CRPrague
34KristýnaBoušovákristyna.bousova-at-gmail.comCalmodulin and S100A1 protein interact with the intracellular termini of the TRPM4 channelInstitute of Physiology AS CRPrague
19JiříBryndabrynda-at-img.cas.czX-ray Structural Analysis of Carbonic Anhydrase and Carborane-Based Inhibitors Complexes Institute of Organic Chemistry and Biochemistry AS CRPrague
94JiříBufkabufkaj-at-gmail.comSynthesis and Spectroscopy of Derivatives of the Fluorescent Protein ChromophoreInstitute of Organic Chemistry and Biochemistry AS CRPrague
81RadkaChaloupkováradka-at-chemi.muni.czComparison of catalytic performance of haloalkane dehalogenases in deep eutectic and organic co-solventsMasaryk UniversityBrno
48TatsianaCharnavetstatsiana.charnavets-at-img.cas.czStructure, stability and thermodynamic characteristics of single stranded DNA in repetitive extragenic palindromic elementsInstitute of Biotechnology AS CRVestec
52ZuzanaChromikovazuzana.chromikova-at-savba.skCrucial role of SpoIIE in Bacillus subtilis cell differentiationInstitute of Molecular Biology Slovak academy of SciencesBratislava
96ZdeněkChvalchval-at-jcu.czMolecular dynamics calculations of the Cy3 and Cy5 cyanine dyes terminally attached to DNAUniversity of South Bohemia in Ceske BudejoviceČeské Budějovice
70LadislavCséfalvaycsefalvay-at-nh.cas.czPurification and Initial Imaging of the type I DNA Restriction-Modification Enzyme EcoR124I by Electron MicroscopyInstiture of Nanobiology and Structural Biology of GCRCNové Hrady
110OksanaDegtjarikdegtjarik648-at-gmail.comCrystallization and structural characterization of LinB86 haloalkane dehalogenase mutantUniversity of South Bohemia in Ceske BudejoviceNove Hrady
33JanDohnálekjan.dohnalek-at-img.cas.czMethods of structural biology of Instruct available to Czech researchersInstitute of Biotechnology AS CRVestec
114RadkaDopitováradka.dopitova-at-gmail.comCrystal Structure of Phosphotransmitter AHP2 and Modeling of its Interaction with Sensor Histidine Kinase CKI1 – Towards Elucidating Molecular Recognition in the Multistep Phosphorelay Signaling in PlantsCEITEC Masaryk UniversityBrno
95DavidDufour Rausellgloria.brossa-at-bestours.esRNA structure prediction by knowledge-based statistical potentials and fragment assemblyPARC CIENTIFICBarcelona
97OlgaDvořáčkovájedla-at-zsf.jcu.czInfluence of substitution effects in the pyridine ring on the reactivity of the trans-[Pt(NH3)2(pyr)Cl]+ complex.University of South Bohemia in Ceske BudejoviceČeské Budějovice
22RudigerEttrichettrich-at-nh.cas.czCharybdotoxin unbinding from the mKv1.3 potassium channel: A Combined computational and experimental studyInstiture of Nanobiology and Structural Biology of GCRCNove Hrady
39KarlaFejfarovákarlafej-at-gmail.comCrystallization and preliminary X-ray diffraction analysis of nepenthesin-1Institute of Macromolecular Chemistry AS CRPrague
78JanFrömmeljan.frommel-at-centrum.czAminoaldehyde dehydrogenase isoenzymes from Pisum sativum oxidize N-acylated aminoaldehydesPalacký University in OlomoucOlomouc
64MartinGolanmartingolan-at-volny.czTheoretical and experimental study of charge transfer through DNA: impact of mercury attached to mismatched base pairsCharles University in Prague MFFPrague
100PavelGrinkevichpavel.grinkevich-at-gmail.comStructure and function of the C-terminal helical domain of the motor subunit HsdR from the type I restriction-modification system EcoR124IUniversity of South Bohemia in Ceske BudejoviceČeské Budějovice
108DipanjanGuhaguha.dipanjan-at-rediffmail.comInitial imaging and structural analysis of the hamartin-tuberin complexCEITEC Masaryk UniversityBrno
15JindřichHašekhasekjh-at-seznam.czInternational appreciation of X-ray crystallographyInstitute of Biotechnology AS CRVestec
104HediHegyihegyihedi-at-gmail.comDomain Integrity Verification of Alternative Splicing – the DIVAS serverCEITEC Masaryk UniversityBrno
111JiříHellerhellej01-at-prf.jcu.czPhotosystem II PsbO protein from higher plantsUniversity of South Bohemia in Ceske BudejoviceČeské Budějovice
62PetrHošekhosekp-at-vscht.czMoving hills – new parallelizable metadynamic method with fixed amount of bias potentialInstitute of Chemical Technology in PraguePrague
69JosefHouserhouser-at-mail.muni.czRSL lectin – a complex approach to study carbohydrate-protein interactionCEITEC Masaryk UniversityBrno
72DominikHrebík376324-at-mail.muni.czInteractions between receiver domain of cytokinin receptor CKI1RD and AHP protein from Arabidopsis thalianaMasaryk UniversityBrno
32IuliiaIermakjulia.ermak90-at-gmail.comCrystallization of glyceraldehyde dehydrogenase from Thermoplasma acidophilumUniversity of South Bohemia in Ceske BudejoviceNove Hrady
86MoranJerabekmoran.jerabek-at-nanotemper.deMicroScale Thermophoresis: Interaction analysis and beyondNanoTemper Technologies GmbHMuenchen
40MichaelaJirkumichaela.jirku-at-seznam.czCharacterization of the calmodulin and S100A1 binding domains on the N-terminus of TRPM1 receptorInstitute of Physiology AS CRPrague
42MiroslavaKacirovakacirova-at-natur.cuni.czStructural studies on Pdc/14-3-3 protein complexCharles University in Prague Faculty of SciencePrague
80RadkaKončitíkováRadka.Koncitikova-at-centrum.czStructure-function study on enzymes linked to cytokinin metabolism – aldehyde dehydrogenases and nucleoside N-ribohydrolasesPalacký University in OlomoucOlomouc
30MiroslavaKopeckakopeckamirka-at-tiscali.czRole of EF-hand motif in the activation of neutral trehalaseInstitute of Physiology AS CRPrague
79DavidKopečnýkopecny_david-at-yahoo.co.ukFamily of plant nucleoside N-ribohydrolasesPalacký University in OlomoucOlomouc
36DaliborKosekdal.kosek-at-gmail.comCharacterization of interactions between protein kinase ASK1 and its binding partners.Charles University in Prague Faculty of SciencePrague
102TeréziaKovaľováterezia.kovalova-at-gmail.comStructural and catalytic properties of α-L-fucosidase from Paenibacillus thiaminolyticusInstitute of Chemical Technology in PraguePrague
107DanielaKrajčíkovádaniela.krajcikova-at-savba.skStudies of Self-assembly Properties of Bacillus Spore Coat ProteinsInstitute of Molecular Biology Slovak academy of SciencesBratislava
55TomášKroupakroupat-at-vscht.czInteraction of M-PMV matrix protein mutants with membranesInstitute of Chemical Technology in PraguePrague
68MonikaKrupovákrupova.monika-at-yahoo.comDetection of Molecular Chirality in Lanthanide Complexes by the Raman Optical ActivityInstitute of Organic Chemistry and Biochemistry AS CRPrague
101ZdeněkKukačkakukacka-at-biomed.cas.czChemical Cross-linking and Hydrogen-Deuterium Exchange –Tools for Precise Definition of Human Haptoglobin StructureInstitute of Microbiology AS CRPrague
24IvanaKuta Smatanovaivanaks-at-seznam.czProtein crystallization projects at the Faculty of Science of the USB CBUniversity of South Bohemia in Ceske BudejoviceČeské Budějovice
103RadomírKuželkuzel-at-karlov.mff.cuni.cz2014 – International Year of CrystallographyCharles University in Prague MFFPrague
41SalomeKylarovaSalomeK-at-seznam.czStructural characterization of the thioredoxin-binding domain of protein kinase ASK1 and its interaction with thioredoxinInstitute of Physiology AS CRPrague
74VeronikaLiškováverca.liskova-at-centrum.czEngineering enzyme access tunnels for protein stabilizationCEITEC Masaryk UniversityBrno
49LucieMarečkoválucie.mareckova-at-img.cas.czKLK2- and KLK11-binding proteins – The novel class of recombinant capture ligands for improved Prostate Cancer diagnosticsInstitute of Biotechnology AS CRPrague
56SérgioMarquessmar96-at-gmail.comInvestigation of gating mechanisms in the access tunnel of haloakane dehalogenasesCEITEC Masaryk UniversityBrno
29JiříMaršíkjiri.marsik-at-rigaku.comLatest Developments for Life Science from RigakuRigaku EuropeSevenoaks
106IvanaNemcovicovaviruivka-at-savba.skCytomegalovirus gpUL141 exhibits unique receptor-binding domain to inhibit cell surface expression of CD155 and TRAIL death receptorsInstitute of Virology of the Slovak Academy of SciencesBratislava
88DanielNěmečekdaniel.nemecek-at-ceitec.muni.czApplication of Difference 3D Electron Microscopy to Identify DSS1 Subunits and Induced Conformational Changes in the Complex with Rad52CEITEC Masaryk UniversityBrno
112ZoraNovakovazora.novakova-at-img.cas.czThe role of the non-pharmacophore pocket of glutamate carboxypeptidase II in the design of small-molecule inhibitorsInstitute of Biotechnology AS CRVestec
84Saurabh KumarPandeypandey-at-nh.cas.czBinding competent states for L-arginine in E. coli arginine repressor apoproteinInstiture of Nanobiology and Structural Biology of GCRCNove Hrady
60JiriPavlicekjiri.pavlicek-at-img.cas.czCrystal structures of complexes of GCPII with P1’-diversified urea-based inhibitorsInstitute of Biotechnology AS CRPrague
109MiroslavPeterekpeterek-at-ceitec.muni.czAssembly and molecular architecture of PI4K IIIa complexesCEITEC Masaryk UniversityBrno
113MariaPlevakamariaplevako-at-gmail.comCrystallization and preliminary diffraction analysis of DhaA57, DhaA80 and DhaA106 mutants from Rhodococcus rhodochrous NCIMB 13064University of South Bohemia in Ceske BudejoviceČeské Budějovice
76DanielPokornýdanny.pokorny-at-gmail.comStructural and functional characterization of Ralstonia solanacearum lectin mutantMasaryk UniversityBrno
21TatyanaPrudnikovatalianensis-at-gmail.comStructural analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkanii USDA94University of South Bohemia in Ceske BudejoviceRoudne
115JakubPtáčekjakub.ptacek-at-img.cas.czSelection and characteriazation of Anticalins specific for human glutamate carboxypeptidase IIInstitute of Biotechnology AS CRPrague
87DavidRehareha-at-nh.cas.czMolecular dynamics comparison of E. coli WrbA apoprotein and holoproteinInstiture of Nanobiology and Structural Biology of GCRCNove Hrady
14BohdanSchneiderbohdan.schneider-at-gmail.comDynamics of biomolecules estimated by crystallographic B-factorsInstitute of Biotechnology AS CRVestec
117LeonaŠeráseral-at-vscht.czPump-probe molecular dynamics (PPMD) simulations in GROMACS and its testing on the PDZ domain.Institute of Chemical Technology in PraguePrague
105TanvirShaikhshaikh-at-ceitec.muni.czInitial bridges between the two ribosomal subunits are formed within 9.4 milliseconds: A time-resolved cryo-EM studyCEITEC Masaryk UniversityBrno
51KatsiarynaShamayevashamayeva-at-nh.cas.czInterdomain communication in the endonuclease/motor subunit of Type I restriction- modification enzyme EcoR124IInstiture of Nanobiology and Structural Biology of GCRCNove Hrady
46TerezaSkálovát.skalova-at-gmail.comStructures of receptors and ligands of mammalian NK cellsInstitute of Biotechnology AS CRVestec
28VernonSmithvernon.smith-at-bruker-axs.deImprovements to Data Quality with the PHOTON 100 detector in Shutterless ModeBruker AXSKarlsruhe
98VojtěchSpiwokspiwokv-at-vscht.czEnhancement of linear vs. non-linear motions in protein foldingInstitute of Chemical Technology in PraguePrague
44JanStránskýstr.jan-at-seznam.czCritical parameters of S-SAD – a real case experienceInstitute of Biotechnology AS CRVestec
26KvidoStrisovskykvido.strisovsky-at-uochb.cas.czCrystal structures of rhomboid intramembrane protease bound to substrate peptides elucidate the basis of substrate specificity and mechanism.Institute of Organic Chemistry and Biochemistry AS CRPrague
120DavidStuartdave-at-strubi.ox.ac.ukChallenges of virus crystallographyUniversity of OxfordOxford
99ZoranŠućursucurz-at-yahoo.comExploring free energy surface of oxytocin by using well-tempered metadynamicsInstitute of Chemical Technology in PraguePrague
75PetraSzelcsányiováPetra.Szelcsanyi-at-seznam.czModification of substrate specificity and catalytic activity of haloalkane dehalogenase linb by opening de novo access tunnelsCEITEC Masaryk UniversityBrno
58KatsiarynaTratsiakktratsiak-at-gmail.comHaloalkane dehalogenases: DmxA from Marinobacter sp. ELB 17 and DpcA from Psychrobacter cryohalolentis K5, from the crystallization to the structure analysisUniversity of South Bohemia in Ceske BudejoviceNove Hrady
38EkaterinaTutubalinatutubalinakate-at-mail.ruCrystallization of FrpC proteinUniversity of South Bohemia in Ceske BudejoviceČeské Budějovice
83MatejZábradyzabradymatej-at-gmail.comRecombinant antibodies for in vivo applicationsCEITEC Masaryk UniversityBrno
61PetraZadravecpetra.zadravec-at-ffa.uni-lj.siDevelopment of lactic acid bacterium capable of binding Shiga toxin on the surfaceUniversity of LjubljanaLjubljana
63VojtěchZapletalvojtis-at-mail.muni.czNMR study of haloalkane dehalogenase DhaA: resonance assignment and relaxationCEITEC Masaryk UniversityBrno
73PaulínaBožíkovápaulina.bozikova-at-gmail.com Institute of Biotechnology AS CRVestec
92LadislavBumbabumba-at-biomed.cas.cz Institute of Microbiology AS CRPrague
122JiříČernýjiri.cerny-at-img.cas.cz Institute of Biotechnology AS CRVestec
13DominikaChalupskáchalupska-at-uochb.cas.cz Institute of Organic Chemistry and Biochemistry AS CRPrague
57RichardHrabalhrabalr-at-vscht.cz Institute of Chemical Technology in PraguePrague
82LubomirJandaljanda-at-sci.muni.cz CEITEC Masaryk universityBrno
16MartinKlímaklima-at-uochb.cas.cz Institute of Organic Chemistry and Biochemistry AS CRPrague
43LucieKolářovákolarovalucie007-at-gmail.com Institute of Biotechnology AS CRVestec
45PetrKolenkokolenko-at-imc.cas.cz Institute of Macromolecular Chemistry AS CRPrague
116MichalKutýkutym-at-seznam.cz University of South Bohemia in Ceske BudejoviceČeské Budějovice
85PetrMalýpetr.maly-at-img.cas.cz Institute of Biotechnology AS CRPrague
124PavelMartásekpavel.martasek-at-gmail.com First Medical Faculty of UKPrague
90BorisMíčboris.mic-at-mt-m.eu Merici technika MoravaZastávka
53PavelMikuleckýpavel.mikulecky-at-img.cas.cz Institute of Biotechnology AS CRVestec
121PhuongNgoc Phamngocphuongpham85-at-gmail.com Institute of Biotechnology AS CRVestec
118PetrNovákpnovak-at-biomed.cas.cz Institute of Microbiology AS CRVestec
91DušanNovotnýdusan.novotny-at-mt-m.eu Merici technika MoravaZastávka
67JaroslavNunvářbotanik-at-atlas.cz Institute of Biotechnology AS CRVestec
35TomášObšilobsil-at-natur.cuni.cz Charles University Faculty of SciencePrague
31VeronikaObsilovaobsilova-at-biomed.cas.cz Institute of Physiology AS CRPrague
119PetrPompachpompach-at-biomed.cas.cz Institute of Microbiology AS CRPrague
54JanPrchalprchalj-at-vscht.cz Institute of Chemical Technology in PraguePrague
27KarelPuflerkarel.pufler-at-img.cas.cz Institute of Biotechnology AS CRPrague
17LenkaRezabkovalenka.rezabkova-at-gmail.com Paul Scherrer InstituteSwitzerland
71KlaudiaŠarmírováklaudia.sarmirova-at-gmail.com Masaryk UniversityBrno
20VladimirSklenarvladimir.sklenar-at-ceitec.muni.cz CEITEC Masaryk UniversityBrno
93RostislavŠkrabanarostislav.skrabana-at-savba.sk Institute of Neuroimmunology SASBratislava
66LeonaŠvecovásvecova.leona-at-seznam.cz Czech Technical UniversityPrague
89DanielSvozilsvozild-at-vscht.cz Institute of Chemical Technology in PraguePrague
25IvanTomcikivantomcik-at-ymail.com Institute of Organic Chemistry and Biochemistry AS CRPrague
50LucieVaňkoválucie.vankova-at-img.cas.cz Institute of Biotechnology AS CRPrague
65JiriVondrasekjiri.vondrasek-at-uochb.cas.cz Institute of Organic Chemistry and Biochemistry AS CRPrague
59MilanZachrdlamzachy-at-mail.muni.cz CEITEC Masaryk UniversityBrno
123JiříZahradníkTylai-at-seznam.cz Institute of Biotechnology AS CRVestec